treewide: with stdenv.lib; in meta -> with lib;

Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix

pkgs/applications/science/misc/convertall/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, python3, wrapQtAppsHook }:
+{ lib, stdenv, fetchFromGitHub, python3, wrapQtAppsHook }:
 
 let
   inherit (python3.pkgs) wrapPython pyqt5;
@@ -27,7 +27,7 @@ in stdenv.mkDerivation rec {
     makeQtWrapper $out/share/convertall/convertall.py $out/bin/convertall
   '';
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = "https://convertall.bellz.org/";
     description = "Graphical unit converter";
     license = licenses.gpl2Plus;

pkgs/applications/science/misc/gephi/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, jdk, maven, javaPackages }:
+{ lib, stdenv, fetchFromGitHub, jdk, maven, javaPackages }:
 
 let
   version = "0.9.2";
@@ -55,7 +55,7 @@ stdenv.mkDerivation {
     echo "jdkhome=${jdk}" >> $out/etc/gephi.conf
   '';
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "A platform for visualizing and manipulating large graphs";
     homepage = "https://gephi.org";
     license = licenses.gpl3;

pkgs/applications/science/misc/gplates/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, qt4, qwt6_qt4, libGLU, libGL, glew, gdal, cgal
+{ lib, stdenv, fetchurl, qt4, qwt6_qt4, libGLU, libGL, glew, gdal, cgal
 , proj, boost, cmake, python2, doxygen, graphviz, gmp, mpfr }:
 
 stdenv.mkDerivation rec {
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
 
   NIX_CFLAGS_LINK="-ldl -lpthread -lutil";
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "Desktop software for the interactive visualisation of plate-tectonics";
     homepage = "https://www.gplates.org";
     license = licenses.gpl2;

pkgs/applications/science/misc/netlogo/default.nix

@@ -1,4 +1,4 @@
-{ jre, stdenv, fetchurl, makeWrapper, makeDesktopItem }:
+{ jre, lib, stdenv, fetchurl, makeWrapper, makeDesktopItem }:
 
 let
 
@@ -44,7 +44,7 @@ stdenv.mkDerivation rec {
     cp ${desktopItem}/share/applications/* $out/share/applications
   '';
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "A multi-agent programmable modeling environment";
     longDescription = ''
       NetLogo is a multi-agent programmable modeling environment. It is used by

pkgs/applications/science/misc/openmodelica/default.nix

@@ -1,4 +1,4 @@
-{stdenv, fetchgit, fetchsvn, autoconf, automake, libtool, gfortran, clang, cmake, gnumake,
+{lib, stdenv, fetchgit, fetchsvn, autoconf, automake, libtool, gfortran, clang, cmake, gnumake,
 hwloc, jre, lapack, blas, hdf5, expat, ncurses, readline, qt4, webkitgtk, which,
 lp_solve, omniorb, sqlite, libatomic_ops, pkgconfig, file, gettext, flex, bison,
 doxygen, boost, openscenegraph, gnome2, xorg, git, bash, gtk2, makeWrapper }:
@@ -42,7 +42,7 @@ stdenv.mkDerivation {
     done
   '';
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "An open-source Modelica-based modeling and simulation environment";
     homepage    = "https://openmodelica.org";
     license     = licenses.gpl3;

pkgs/applications/science/misc/openmvs/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, pkgconfig, cmake
+{ lib, stdenv, fetchFromGitHub, pkgconfig, cmake
 , eigen, opencv, ceres-solver, cgal, boost, vcg
 , gmp, mpfr, glog, gflags, libjpeg_turbo }:
 
@@ -50,7 +50,7 @@ stdenv.mkDerivation {
 
   dontUseCmakeBuildDir = true;
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "A library for computer-vision scientists and especially targeted to the Multi-View Stereo reconstruction community";
     homepage = "http://cdcseacave.github.io/openMVS/";
     license = licenses.agpl3;

pkgs/applications/science/misc/rink/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchFromGitHub, rustPlatform, openssl, pkg-config, ncurses }:
+{ lib, stdenv, fetchFromGitHub, rustPlatform, openssl, pkg-config, ncurses }:
 
 rustPlatform.buildRustPackage rec {
   version = "0.5.1";
@@ -19,7 +19,7 @@ rustPlatform.buildRustPackage rec {
   # Some tests fail and/or attempt to use internet servers.
   doCheck = false;
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     description = "Unit-aware calculator";
     homepage = "https://rinkcalc.app";
     license = with licenses; [ mpl20 gpl3 ];

pkgs/applications/science/misc/root/5.nix

@@ -1,4 +1,4 @@
-{ stdenv, fetchurl, fetchpatch, cmake, pcre, pkg-config, python2
+{ lib, stdenv, fetchurl, fetchpatch, cmake, pcre, pkg-config, python2
 , libX11, libXpm, libXft, libXext, libGLU, libGL, zlib, libxml2, lz4, lzma, gsl_1, xxHash
 , Cocoa, OpenGL, noSplash ? false }:
 
@@ -79,7 +79,7 @@ stdenv.mkDerivation rec {
 
   setupHook = ./setup-hook.sh;
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = "https://root.cern.ch/";
     description = "A data analysis framework";
     platforms = platforms.unix;

pkgs/applications/science/misc/root/default.nix

@@ -89,7 +89,7 @@ stdenv.mkDerivation rec {
 
   setupHook = ./setup-hook.sh;
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = "https://root.cern.ch/";
     description = "A data analysis framework";
     platforms = platforms.unix;

pkgs/applications/science/misc/snakemake/default.nix

@@ -1,4 +1,4 @@
-{ stdenv, python3Packages }:
+{ lib, stdenv, python3Packages }:
 
 python3Packages.buildPythonApplication rec {
   pname = "snakemake";
@@ -28,7 +28,7 @@ python3Packages.buildPythonApplication rec {
 
   doCheck = false; # Tests depend on Google Cloud credentials at ${HOME}/gcloud-service-key.json
 
-  meta = with stdenv.lib; {
+  meta = with lib; {
     homepage = "https://snakemake.readthedocs.io";
     license = licenses.mit;
     description = "Python-based execution environment for make-like workflows";