pkgs/development/libraries: stdenv.lib -> lib
This commit is contained in:
Ben Siraphob
committed by
Jonathan Ringer
Jonathan Ringer
parent
046d24424e
commit
66e44425c6
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
}:
|
||||
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation {
|
||||
doCheck = true;
|
||||
checkTarget = "test";
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://icl.utk.edu/papi/";
|
||||
description = "PAPI provides the tool designer and application engineer with a consistent interface and methodology for use of the performance counter hardware found in most major microprocessors";
|
||||
license = licenses.bsdOriginal;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, libminc }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, libminc }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "EBTKS";
|
||||
@@ -16,7 +16,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/BIC-MNI/${pname}";
|
||||
description = "Library for working with MINC files";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, libminc, bicpl, freeglut, mesa_glu }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, libminc, bicpl, freeglut, mesa_glu }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "bicgl";
|
||||
@@ -21,7 +21,7 @@ stdenv.mkDerivation rec {
|
||||
"-DBICPL_DIR=${bicpl}/lib"
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/${owner}/${pname}";
|
||||
description = "Brain Imaging Centre graphics library";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, libminc, netpbm }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, libminc, netpbm }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "bicpl";
|
||||
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
|
||||
doCheck = false;
|
||||
# internal_volume_io.h: No such file or directory
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/${owner}/${pname}";
|
||||
description = "Brain Imaging Centre programming library";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "bpp-core";
|
||||
@@ -26,7 +26,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
doCheck = !stdenv.isDarwin;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://biopp.univ-montp2.fr/wiki/index.php/Main_Page";
|
||||
changelog = "https://github.com/BioPP/bpp-core/blob/master/ChangeLog";
|
||||
description = "C++ bioinformatics libraries and tools";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, fetchpatch, cmake, itk, python3, Cocoa }:
|
||||
{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake, itk, python3, Cocoa }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "elastix";
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
|
||||
];
|
||||
|
||||
nativeBuildInputs = [ cmake python3 ];
|
||||
buildInputs = [ itk ] ++ stdenv.lib.optionals stdenv.isDarwin [ Cocoa ];
|
||||
buildInputs = [ itk ] ++ lib.optionals stdenv.isDarwin [ Cocoa ];
|
||||
|
||||
doCheck = !stdenv.isDarwin; # usual dynamic linker issues
|
||||
|
||||
@@ -28,7 +28,7 @@ stdenv.mkDerivation rec {
|
||||
export LD_LIBRARY_PATH=$(pwd)/bin
|
||||
";
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://elastix.isi.uu.nl/";
|
||||
description = "Image registration toolkit based on ITK";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, expat, nifticlib, zlib }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, expat, nifticlib, zlib }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "gifticlib";
|
||||
@@ -24,7 +24,7 @@ stdenv.mkDerivation rec {
|
||||
runHook postCheck
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://www.nitrc.org/projects/gifti";
|
||||
description = "Medical imaging geometry format C API";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, zlib, bzip2, lzma, curl, perl }:
|
||||
{ lib, stdenv, fetchurl, zlib, bzip2, lzma, curl, perl }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "htslib";
|
||||
@@ -26,7 +26,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "A C library for reading/writing high-throughput sequencing data";
|
||||
license = licenses.mit;
|
||||
homepage = "http://www.htslib.org/";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, gtest, fetchFromGitHub, cmake, boost, eigen, python, vtk, zlib, tbb }:
|
||||
{ lib, stdenv, gtest, fetchFromGitHub, cmake, boost, eigen, python, vtk, zlib, tbb }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
version = "2.0.0";
|
||||
@@ -34,7 +34,7 @@ stdenv.mkDerivation rec {
|
||||
nativeBuildInputs = [ cmake gtest ];
|
||||
buildInputs = [ boost eigen python vtk zlib tbb ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/BioMedIA/MIRTK";
|
||||
description = "Medical image registration library and tools";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, zlib }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, zlib }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "nifticlib";
|
||||
@@ -23,7 +23,7 @@ stdenv.mkDerivation rec {
|
||||
'';
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://nifti-imaging.github.io";
|
||||
description = "Medical imaging format C API";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, libminc, bicpl, arguments, pcre-cpp }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, libminc, bicpl, arguments, pcre-cpp }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "oobicpl";
|
||||
@@ -21,7 +21,7 @@ stdenv.mkDerivation rec {
|
||||
"-DARGUMENTS_DIR=${arguments}/lib"
|
||||
"-DOOBICPL_BUILD_SHARED_LIBS=TRUE" ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/${owner}/${pname}";
|
||||
description = "Brain Imaging Centre object-oriented programming library (and tools)";
|
||||
maintainers = with maintainers; [ bcdarwin ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake }:
|
||||
{ lib, stdenv, fetchFromGitHub, cmake }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "QuadProgpp";
|
||||
@@ -14,7 +14,7 @@ stdenv.mkDerivation rec {
|
||||
nativeBuildInputs = [ cmake ];
|
||||
buildInputs = [ ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/liuq/QuadProgpp";
|
||||
license = licenses.mit;
|
||||
description = ''
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, perl
|
||||
, python3
|
||||
@@ -43,7 +43,7 @@ in stdenv.mkDerivation rec {
|
||||
configureFlags = [
|
||||
"--enable-cblas"
|
||||
"--blas-int-size=${blasIntSize}"
|
||||
] ++ stdenv.lib.optionals withOpenMP [ "--enable-threading=openmp" ]
|
||||
] ++ lib.optionals withOpenMP [ "--enable-threading=openmp" ]
|
||||
++ [ withArchitecture ];
|
||||
|
||||
postPatch = ''
|
||||
@@ -57,7 +57,7 @@ in stdenv.mkDerivation rec {
|
||||
ln -s $out/lib/libcblas.so.3 $out/lib/libcblas.so
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "BLAS-compatible library optimized for AMD CPUs";
|
||||
homepage = "https://developer.amd.com/amd-aocl/blas-library/";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -62,7 +62,7 @@ stdenv.mkDerivation rec {
|
||||
ln -s $out/lib/libflame.so.${version} $out/lib/liblapacke.so.3
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "LAPACK-compatible linear algebra library optimized for AMD CPUs";
|
||||
homepage = "https://developer.amd.com/amd-aocl/blas-library/";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake
|
||||
{ lib, stdenv, fetchFromGitHub, cmake
|
||||
, gfortran, blas, lapack, eigen }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
@@ -24,7 +24,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
cmakeFlags = [
|
||||
"-DBUILD_SHARED_LIBS=ON"
|
||||
"-DINTERFACE64=${stdenv.lib.optionalString blas.isILP64 "1"}"
|
||||
"-DINTERFACE64=${lib.optionalString blas.isILP64 "1"}"
|
||||
];
|
||||
|
||||
preCheck = if stdenv.isDarwin then ''
|
||||
@@ -48,8 +48,8 @@ stdenv.mkDerivation rec {
|
||||
A collection of Fortran77 subroutines to solve large scale eigenvalue
|
||||
problems.
|
||||
'';
|
||||
license = stdenv.lib.licenses.bsd3;
|
||||
maintainers = [ stdenv.lib.maintainers.ttuegel ];
|
||||
platforms = stdenv.lib.platforms.unix;
|
||||
license = lib.licenses.bsd3;
|
||||
maintainers = [ lib.maintainers.ttuegel ];
|
||||
platforms = lib.platforms.unix;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, gfortran }:
|
||||
{ lib, stdenv, fetchurl, gfortran }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "blas";
|
||||
@@ -38,7 +38,7 @@ stdenv.mkDerivation rec {
|
||||
installPhase =
|
||||
# FreeBSD's stdenv doesn't use Coreutils.
|
||||
let dashD = if stdenv.isFreeBSD then "" else "-D"; in
|
||||
(stdenv.lib.optionalString stdenv.isFreeBSD "mkdir -p $out/lib ;")
|
||||
(lib.optionalString stdenv.isFreeBSD "mkdir -p $out/lib ;")
|
||||
+ ''
|
||||
install ${dashD} -m755 libblas.a "$out/lib/libblas.a"
|
||||
install ${dashD} -m755 libblas.so.${version} "$out/lib/libblas.so.${version}"
|
||||
@@ -55,7 +55,7 @@ Libs: -L$out/lib -lblas
|
||||
EOF
|
||||
'';
|
||||
|
||||
preFixup = stdenv.lib.optionalString stdenv.isDarwin ''
|
||||
preFixup = lib.optionalString stdenv.isDarwin ''
|
||||
for fn in $(find $out/lib -name "*.so*"); do
|
||||
if [ -L "$fn" ]; then continue; fi
|
||||
install_name_tool -id "$fn" "$fn"
|
||||
@@ -64,8 +64,8 @@ EOF
|
||||
|
||||
meta = {
|
||||
description = "Basic Linear Algebra Subprograms";
|
||||
license = stdenv.lib.licenses.publicDomain;
|
||||
license = lib.licenses.publicDomain;
|
||||
homepage = "http://www.netlib.org/blas/";
|
||||
platforms = stdenv.lib.platforms.unix;
|
||||
platforms = lib.platforms.unix;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, perl
|
||||
, python3
|
||||
@@ -40,7 +40,7 @@ in stdenv.mkDerivation rec {
|
||||
configureFlags = [
|
||||
"--enable-cblas"
|
||||
"--blas-int-size=${blasIntSize}"
|
||||
] ++ stdenv.lib.optionals withOpenMP [ "--enable-threading=openmp" ]
|
||||
] ++ lib.optionals withOpenMP [ "--enable-threading=openmp" ]
|
||||
++ [ withArchitecture ];
|
||||
|
||||
postPatch = ''
|
||||
@@ -54,7 +54,7 @@ in stdenv.mkDerivation rec {
|
||||
ln -s $out/lib/libcblas.so.3 $out/lib/libcblas.so
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "BLAS-compatible linear algebra library";
|
||||
homepage = "https://github.com/flame/blis";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, pkg-config
|
||||
@@ -36,7 +36,7 @@ stdenv.mkDerivation rec {
|
||||
pkg-config
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/BRiAl/BRiAl";
|
||||
description = "Legacy version of PolyBoRi maintained by sagemath developers";
|
||||
license = licenses.gpl2Plus;
|
||||
|
||||
@@ -136,8 +136,8 @@ stdenv.mkDerivation rec {
|
||||
algorithms. You can bring your creations to scale using the power of GPUs in the
|
||||
cloud or to the masses on mobile with Caffe2's cross-platform libraries.
|
||||
'';
|
||||
platforms = with stdenv.lib.platforms; linux;
|
||||
license = stdenv.lib.licenses.asl20;
|
||||
maintainers = with stdenv.lib.maintainers; [ yuriaisaka ];
|
||||
platforms = with lib.platforms; linux;
|
||||
license = lib.licenses.asl20;
|
||||
maintainers = with lib.maintainers; [ yuriaisaka ];
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, gfortran, suitesparse, blas, lapack }:
|
||||
{ lib, stdenv, fetchFromGitHub, gfortran, suitesparse, blas, lapack }:
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "cholmod-extra";
|
||||
version = "1.2.0";
|
||||
@@ -23,7 +23,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/jluttine/cholmod-extra";
|
||||
description = "A set of additional routines for SuiteSparse CHOLMOD Module";
|
||||
license = with licenses; [ gpl2Plus ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, cmake
|
||||
, gfortran
|
||||
@@ -41,19 +41,19 @@ stdenv.mkDerivation rec {
|
||||
blas
|
||||
python
|
||||
boost
|
||||
] ++ stdenv.lib.optionals (!stdenv.isDarwin) [
|
||||
] ++ lib.optionals (!stdenv.isDarwin) [
|
||||
ocl-icd
|
||||
opencl-headers
|
||||
] ++ stdenv.lib.optionals stdenv.isDarwin [
|
||||
] ++ lib.optionals stdenv.isDarwin [
|
||||
Accelerate
|
||||
CoreGraphics
|
||||
CoreVideo
|
||||
];
|
||||
propagatedBuildInputs = stdenv.lib.optionals stdenv.isDarwin [
|
||||
propagatedBuildInputs = lib.optionals stdenv.isDarwin [
|
||||
OpenCL
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/clMathLibraries/clBLAS";
|
||||
description = "A software library containing BLAS functions written in OpenCL";
|
||||
longDescription = ''
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
}:
|
||||
@@ -21,7 +21,7 @@ stdenv.mkDerivation rec {
|
||||
autoreconfHook
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://users.aalto.fi/~pat/cliquer.html";
|
||||
downloadPage = src.meta.homepage; # autocliquer
|
||||
description = "Routines for clique searching";
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{ stdenv, fetchurl, gfortran, opencl-headers, clblas, ocl-icd, mkl, intel-ocl }:
|
||||
{ lib, stdenv, fetchurl, gfortran, opencl-headers, clblas, ocl-icd, mkl, intel-ocl }:
|
||||
|
||||
with stdenv.lib;
|
||||
with lib;
|
||||
|
||||
let
|
||||
version = "1.3.0";
|
||||
@@ -65,7 +65,7 @@ in stdenv.mkDerivation {
|
||||
cp ${incfile} make.inc
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Matrix Algebra on GPU and Multicore Architectures, OpenCL port";
|
||||
license = licenses.bsd3;
|
||||
homepage = "http://icl.cs.utk.edu/magma/index.html";
|
||||
|
||||
@@ -57,7 +57,7 @@ stdenv.mkDerivation {
|
||||
majorVersion = lib.versions.major version;
|
||||
};
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "NVIDIA CUDA Deep Neural Network library (cuDNN)";
|
||||
homepage = "https://developer.nvidia.com/cudnn";
|
||||
license = licenses.unfree;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub }:
|
||||
{ lib, stdenv, fetchFromGitHub }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "ecos";
|
||||
@@ -27,7 +27,7 @@ stdenv.mkDerivation rec {
|
||||
cp -r include $out/
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "A lightweight conic solver for second-order cone programming";
|
||||
homepage = "https://www.embotech.com/ECOS";
|
||||
downloadPage = "https://github.com/embotech/ecos/releases";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, fetchpatch
|
||||
, boost
|
||||
@@ -50,8 +50,8 @@ let
|
||||
meta = {
|
||||
description = "Distributed just-in-time shared library building";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
|
||||
@@ -80,8 +80,8 @@ let
|
||||
meta = {
|
||||
description = "Automatic generation of finite element basis functions";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
|
||||
@@ -102,8 +102,8 @@ let
|
||||
meta = {
|
||||
description = "A domain-specific language for finite element variational forms";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
|
||||
@@ -139,8 +139,8 @@ let
|
||||
meta = {
|
||||
description = "A compiler for finite element variational forms";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
dolfin = stdenv.mkDerivation {
|
||||
@@ -215,7 +215,7 @@ let
|
||||
meta = {
|
||||
description = "The FEniCS Problem Solving Environment in Python and C++";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
python-dolfin = pythonPackages.buildPythonPackage rec {
|
||||
@@ -254,8 +254,8 @@ let
|
||||
meta = {
|
||||
description = "Python bindings for the DOLFIN FEM compiler";
|
||||
homepage = "https://fenicsproject.org/";
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.all;
|
||||
license = lib.licenses.lgpl3;
|
||||
};
|
||||
};
|
||||
in python-dolfin
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, gmp
|
||||
@@ -29,7 +29,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/sagemath/FlintQS";
|
||||
description = "Highly optimized multi-polynomial quadratic sieve for integer factorization";
|
||||
license = with licenses; [ gpl2 ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, unzip, blas, lapack, gfortran }:
|
||||
{ lib, stdenv, fetchurl, unzip, blas, lapack, gfortran }:
|
||||
|
||||
assert (!blas.isILP64) && (!lapack.isILP64);
|
||||
|
||||
@@ -24,7 +24,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
enableParallelBuilding = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "A software package for large-scale nonlinear optimization";
|
||||
homepage = "https://projects.coin-or.org/Ipopt";
|
||||
license = licenses.epl10;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, cmake
|
||||
, gtest
|
||||
@@ -43,7 +43,7 @@ stdenv.mkDerivation rec {
|
||||
./gtests/itpp_gtests
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "IT++ is a C++ library of mathematical, signal processing and communication classes and functions";
|
||||
homepage = http://itpp.sourceforge.net/;
|
||||
license = licenses.gpl3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, fetchpatch
|
||||
, pari
|
||||
@@ -68,13 +68,13 @@ stdenv.mkDerivation rec {
|
||||
url = "https://git.archlinux.org/svntogit/community.git/plain/trunk/lcalc-c++11.patch?h=packages/lcalc&id=3607b97df5a8c231191115b0cb5c62426b339e71";
|
||||
sha256 = "1ccrl61lv2vvx8ggldq54m5d0n1iy6mym7qz0i8nj6yj0dshnpk3";
|
||||
})
|
||||
] ++ stdenv.lib.optional stdenv.isDarwin
|
||||
] ++ lib.optional stdenv.isDarwin
|
||||
(fetchpatch {
|
||||
url = "https://git.sagemath.org/sage.git/plain/build/pkgs/lcalc/patches/clang.patch";
|
||||
sha256 = "0bb7656z6cp6i4p2qj745cmq0lhh52v2akl9whi760dynfdxbl18";
|
||||
});
|
||||
|
||||
postPatch = stdenv.lib.optionalString stdenv.isDarwin ''
|
||||
postPatch = lib.optionalString stdenv.isDarwin ''
|
||||
substituteInPlace src/Makefile --replace g++ c++
|
||||
'';
|
||||
|
||||
@@ -87,7 +87,7 @@ stdenv.mkDerivation rec {
|
||||
"PARI_PREFIX=${pari}"
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://oto.math.uwaterloo.ca/~mrubinst/L_function_public/L.html";
|
||||
description = "A program for calculating with L-functions";
|
||||
license = with licenses; [ gpl2 ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
}:
|
||||
@@ -21,7 +21,7 @@ stdenv.mkDerivation rec {
|
||||
# no tests included for now (2018-08-05), but can't hurt to activate
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/miguelmarco/libbraiding/";
|
||||
description = "C++ library for computations on braid groups";
|
||||
longDescription = ''
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, autoreconfHook
|
||||
, boehmgc
|
||||
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/miguelmarco/libhomfly/";
|
||||
description = "Library to compute the homfly polynomial of knots and links";
|
||||
license = licenses.unlicense;
|
||||
|
||||
@@ -1,5 +1,5 @@
|
||||
{
|
||||
stdenv,
|
||||
lib, stdenv,
|
||||
fetchFromGitHub,
|
||||
gfortran,
|
||||
cmake,
|
||||
@@ -7,7 +7,7 @@
|
||||
shared ? true
|
||||
}:
|
||||
let
|
||||
inherit (stdenv.lib) optional;
|
||||
inherit (lib) optional;
|
||||
version = "3.9.0";
|
||||
in
|
||||
|
||||
@@ -33,7 +33,7 @@ stdenv.mkDerivation {
|
||||
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
inherit version;
|
||||
description = "Linear Algebra PACKage";
|
||||
homepage = "http://www.netlib.org/lapack/";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl }:
|
||||
{ lib, stdenv, fetchurl }:
|
||||
stdenv.mkDerivation {
|
||||
name = "liblbfgs-1.10";
|
||||
|
||||
@@ -11,7 +11,7 @@ stdenv.mkDerivation {
|
||||
meta = {
|
||||
description = "Library of Limited-memory Broyden-Fletcher-Goldfarb-Shanno (L-BFGS)";
|
||||
homepage = "http://www.chokkan.org/software/liblbfgs/";
|
||||
license = stdenv.lib.licenses.mit;
|
||||
platforms = stdenv.lib.platforms.unix;
|
||||
license = lib.licenses.mit;
|
||||
platforms = lib.platforms.unix;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -25,7 +25,7 @@ in stdenv.mkDerivation {
|
||||
nativeBuildInputs =
|
||||
if stdenv.isDarwin then [ fixDarwinDylibNames ]
|
||||
else [ addOpenGLRunpath patchelf ]
|
||||
++ stdenv.lib.optionals cudaSupport [ addOpenGLRunpath ];
|
||||
++ lib.optionals cudaSupport [ addOpenGLRunpath ];
|
||||
|
||||
buildInputs = [
|
||||
stdenv.cc.cc
|
||||
@@ -57,9 +57,9 @@ in stdenv.mkDerivation {
|
||||
|
||||
postFixup = let
|
||||
libPaths = [ stdenv.cc.cc.lib ]
|
||||
++ stdenv.lib.optionals cudaSupport [ nvidia_x11 ];
|
||||
rpath = stdenv.lib.makeLibraryPath libPaths;
|
||||
in stdenv.lib.optionalString stdenv.isLinux ''
|
||||
++ lib.optionals cudaSupport [ nvidia_x11 ];
|
||||
rpath = lib.makeLibraryPath libPaths;
|
||||
in lib.optionalString stdenv.isLinux ''
|
||||
find $out/lib -type f \( -name '*.so' -or -name '*.so.*' \) | while read lib; do
|
||||
echo "setting rpath for $lib..."
|
||||
patchelf --set-rpath "${rpath}:$out/lib" "$lib"
|
||||
@@ -67,7 +67,7 @@ in stdenv.mkDerivation {
|
||||
addOpenGLRunpath "$lib"
|
||||
''}
|
||||
done
|
||||
'' + stdenv.lib.optionalString stdenv.isDarwin ''
|
||||
'' + lib.optionalString stdenv.isDarwin ''
|
||||
install_name_tool -change @rpath/libshm.dylib $out/lib/libshm.dylib $out/lib/libtorch_python.dylib
|
||||
install_name_tool -change @rpath/libc10.dylib $out/lib/libc10.dylib $out/lib/libtorch_python.dylib
|
||||
install_name_tool -change @rpath/libiomp5.dylib $out/lib/libiomp5.dylib $out/lib/libtorch_python.dylib
|
||||
@@ -110,7 +110,7 @@ in stdenv.mkDerivation {
|
||||
|
||||
passthru.tests.cmake = callPackage ./test { };
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "C++ API of the PyTorch machine learning framework";
|
||||
homepage = "https://pytorch.org/";
|
||||
license = licenses.unfree; # Includes CUDA and Intel MKL.
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{stdenv, fetchurl, gmp}:
|
||||
{lib, stdenv, fetchurl, gmp}:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "lrs";
|
||||
@@ -18,9 +18,9 @@ stdenv.mkDerivation rec {
|
||||
meta = {
|
||||
inherit version;
|
||||
description = "Implementation of the reverse search algorithm for vertex enumeration/convex hull problems";
|
||||
license = stdenv.lib.licenses.gpl2 ;
|
||||
maintainers = [stdenv.lib.maintainers.raskin];
|
||||
platforms = stdenv.lib.platforms.linux;
|
||||
license = lib.licenses.gpl2 ;
|
||||
maintainers = [lib.maintainers.raskin];
|
||||
platforms = lib.platforms.linux;
|
||||
homepage = "http://cgm.cs.mcgill.ca/~avis/C/lrs.html";
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromBitbucket
|
||||
, autoreconfHook
|
||||
}:
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
|
||||
autoreconfHook
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://malb.bitbucket.io/m4ri/";
|
||||
description = "Library to do fast arithmetic with dense matrices over F_2";
|
||||
license = licenses.gpl2Plus;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromBitbucket
|
||||
, autoreconfHook
|
||||
, m4ri
|
||||
@@ -25,7 +25,7 @@ stdenv.mkDerivation rec {
|
||||
autoreconfHook
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://malb.bitbucket.io/m4rie/";
|
||||
description = "Library for matrix multiplication, reduction and inversion over GF(2^k) for 2 <= k <= 10";
|
||||
longDescription = ''
|
||||
|
||||
@@ -1,6 +1,6 @@
|
||||
{ stdenv, fetchurl, cmake, gfortran, ninja, cudatoolkit, libpthreadstubs, lapack, blas }:
|
||||
{ lib, stdenv, fetchurl, cmake, gfortran, ninja, cudatoolkit, libpthreadstubs, lapack, blas }:
|
||||
|
||||
with stdenv.lib;
|
||||
with lib;
|
||||
|
||||
let version = "2.5.4";
|
||||
|
||||
@@ -43,7 +43,7 @@ in stdenv.mkDerivation {
|
||||
> $out/lib/pkgconfig/magma.pc
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Matrix Algebra on GPU and Multicore Architectures";
|
||||
license = licenses.bsd3;
|
||||
homepage = "http://icl.cs.utk.edu/magma/index.html";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, unzip, cmake }:
|
||||
{ lib, stdenv, fetchurl, unzip, cmake }:
|
||||
|
||||
stdenv.mkDerivation {
|
||||
name = "metis-5.1.0";
|
||||
@@ -14,7 +14,7 @@ stdenv.mkDerivation {
|
||||
meta = {
|
||||
description = "Serial graph partitioning and fill-reducing matrix ordering";
|
||||
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/metis/overview";
|
||||
license = stdenv.lib.licenses.asl20;
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = lib.licenses.asl20;
|
||||
platforms = lib.platforms.all;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, cmake
|
||||
}:
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
|
||||
cmake
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Graph Coarsening and Partitioning Library";
|
||||
homepage = "https://github.com/ScottKolo/Mongoose";
|
||||
license = licenses.gpl3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, which, cudatoolkit, addOpenGLRunpath }:
|
||||
{ lib, stdenv, fetchFromGitHub, which, cudatoolkit, addOpenGLRunpath }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
name = "nccl-${version}-cuda-${cudatoolkit.majorVersion}";
|
||||
@@ -38,7 +38,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
enableParallelBuilding = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Multi-GPU and multi-node collective communication primitives for NVIDIA GPUs";
|
||||
homepage = "https://developer.nvidia.com/nccl";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, perl, which
|
||||
{ lib, stdenv, fetchFromGitHub, perl, which
|
||||
# Most packages depending on openblas expect integer width to match
|
||||
# pointer width, but some expect to use 32-bit integers always
|
||||
# (for compatibility with reference BLAS).
|
||||
@@ -19,7 +19,7 @@
|
||||
, enableShared ? !stdenv.hostPlatform.isStatic
|
||||
}:
|
||||
|
||||
with stdenv.lib;
|
||||
with lib;
|
||||
|
||||
let blas64_ = blas64; in
|
||||
|
||||
@@ -160,7 +160,7 @@ stdenv.mkDerivation rec {
|
||||
NO_BINARY_MODE = if stdenv.isx86_64
|
||||
then toString (stdenv.hostPlatform != stdenv.buildPlatform)
|
||||
else stdenv.hostPlatform != stdenv.buildPlatform;
|
||||
} // (stdenv.lib.optionalAttrs singleThreaded {
|
||||
} // (lib.optionalAttrs singleThreaded {
|
||||
# As described on https://github.com/xianyi/OpenBLAS/wiki/Faq/4bded95e8dc8aadc70ce65267d1093ca7bdefc4c#multi-threaded
|
||||
USE_THREAD = false;
|
||||
USE_LOCKING = true; # available with openblas >= 0.3.7
|
||||
@@ -188,14 +188,14 @@ EOF
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/libcblas${shlibExt}
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/liblapack${shlibExt}
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/liblapacke${shlibExt}
|
||||
'' + stdenv.lib.optionalString stdenv.hostPlatform.isLinux ''
|
||||
'' + lib.optionalString stdenv.hostPlatform.isLinux ''
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/libblas${shlibExt}.3
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/libcblas${shlibExt}.3
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/liblapack${shlibExt}.3
|
||||
ln -s $out/lib/libopenblas${shlibExt} $out/lib/liblapacke${shlibExt}.3
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Basic Linear Algebra Subprograms";
|
||||
license = licenses.bsd3;
|
||||
homepage = "https://github.com/xianyi/OpenBLAS";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl }:
|
||||
{ lib, stdenv, fetchurl }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "openlibm";
|
||||
@@ -13,8 +13,8 @@ stdenv.mkDerivation rec {
|
||||
meta = {
|
||||
description = "High quality system independent, portable, open source libm implementation";
|
||||
homepage = "https://openlibm.org/";
|
||||
license = stdenv.lib.licenses.mit;
|
||||
maintainers = [ stdenv.lib.maintainers.ttuegel ];
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = lib.licenses.mit;
|
||||
maintainers = [ lib.maintainers.ttuegel ];
|
||||
platforms = lib.platforms.all;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, gfortran }:
|
||||
{ lib, stdenv, fetchurl, gfortran }:
|
||||
|
||||
stdenv.mkDerivation {
|
||||
name = "openspecfun-0.5.3";
|
||||
@@ -14,8 +14,8 @@ stdenv.mkDerivation {
|
||||
meta = {
|
||||
description = "A collection of special mathematical functions";
|
||||
homepage = "https://github.com/JuliaLang/openspecfun";
|
||||
license = stdenv.lib.licenses.mit;
|
||||
maintainers = [ stdenv.lib.maintainers.ttuegel ];
|
||||
platforms = stdenv.lib.platforms.all;
|
||||
license = lib.licenses.mit;
|
||||
maintainers = [ lib.maintainers.ttuegel ];
|
||||
platforms = lib.platforms.all;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, abseil-cpp, gflags, which
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, abseil-cpp, gflags, which
|
||||
, lsb-release, glog, protobuf, cbc, zlib
|
||||
, ensureNewerSourcesForZipFilesHook, python, swig }:
|
||||
|
||||
@@ -55,7 +55,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
outputs = [ "out" "python" ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/google/or-tools";
|
||||
license = licenses.asl20;
|
||||
description = ''
|
||||
|
||||
@@ -32,7 +32,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
passthru = { inherit withGurobi withCplex; };
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "An abstract base class to a generic linear programming (LP) solver";
|
||||
homepage = "https://github.com/coin-or/Osi";
|
||||
license = licenses.epl10;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, cmake
|
||||
}:
|
||||
@@ -17,7 +17,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
nativeBuildInputs = [ cmake ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "A quadratic programming solver using operator splitting";
|
||||
homepage = "https://osqp.org";
|
||||
license = licenses.asl20;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, cmake
|
||||
, mpi
|
||||
@@ -24,7 +24,7 @@ stdenv.mkDerivation rec {
|
||||
make config metis_path=$PWD/metis gklib_path=$PWD/metis/GKlib prefix=$out
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "An MPI-based parallel library that implements a variety of algorithms for partitioning unstructured graphs, meshes, and for computing fill-reducing orderings of sparse matrices";
|
||||
homepage = "http://glaros.dtc.umn.edu/gkhome/metis/parmetis/overview";
|
||||
platforms = platforms.all;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv , darwin , fetchurl , blas , gfortran , lapack , python }:
|
||||
{ lib, stdenv , darwin , fetchurl , blas , gfortran , lapack , python }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "petsc";
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
|
||||
prePatch = ''
|
||||
substituteInPlace configure \
|
||||
--replace /bin/sh /usr/bin/python
|
||||
'' + stdenv.lib.optionalString stdenv.isDarwin ''
|
||||
'' + lib.optionalString stdenv.isDarwin ''
|
||||
substituteInPlace config/install.py \
|
||||
--replace /usr/bin/install_name_tool ${darwin.cctools}/bin/install_name_tool
|
||||
'';
|
||||
@@ -39,7 +39,7 @@ stdenv.mkDerivation rec {
|
||||
)
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = ''
|
||||
Library of linear algebra algorithms for solving partial differential
|
||||
equations
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, fetchpatch
|
||||
, autoreconfHook
|
||||
@@ -29,7 +29,7 @@ stdenv.mkDerivation rec {
|
||||
})
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://github.com/graph-algorithms/edge-addition-planarity-suite";
|
||||
description = "A library for implementing graph algorithms";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, cmake }:
|
||||
{ lib, stdenv, fetchurl, cmake }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "primesieve";
|
||||
@@ -11,7 +11,7 @@ stdenv.mkDerivation rec {
|
||||
sha256 = "0g60br3p8di92jx3pr2bb51xh15gg57l7qvwzwn7xf7l585hgi7v";
|
||||
};
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Fast C/C++ prime number generator";
|
||||
homepage = "https://primesieve.org/";
|
||||
license = licenses.bsd2;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
}:
|
||||
|
||||
@@ -18,7 +18,7 @@ stdenv.mkDerivation rec {
|
||||
# check phase is empty for now (as of version 0.7)
|
||||
doCheck = true;
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Calculates rank-width and rank-decompositions";
|
||||
license = with licenses; [ gpl2Plus ];
|
||||
maintainers = teams.sage.members;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, fetchpatch
|
||||
, coreutils
|
||||
@@ -45,7 +45,7 @@ stdenv.mkDerivation rec {
|
||||
})
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "https://wiki.sagemath.org/spkg/rubiks";
|
||||
description = "Several programs for working with Rubik's cubes";
|
||||
# The individual websites are no longer available
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, cmake, openssh
|
||||
{ lib, stdenv, fetchFromGitHub, cmake, openssh
|
||||
, gfortran, mpi, blas, lapack
|
||||
} :
|
||||
|
||||
@@ -42,7 +42,7 @@ stdenv.mkDerivation rec {
|
||||
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH''${LD_LIBRARY_PATH:+:}`pwd`/lib
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://www.netlib.org/scalapack/";
|
||||
description = "Library of high-performance linear algebra routines for parallel distributed memory machines";
|
||||
license = licenses.bsd3;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchFromGitHub, blas, lapack, gfortran, fixDarwinDylibNames }:
|
||||
{ lib, stdenv, fetchFromGitHub, blas, lapack, gfortran, fixDarwinDylibNames }:
|
||||
|
||||
assert (!blas.isILP64) && (!lapack.isILP64);
|
||||
|
||||
@@ -20,7 +20,7 @@ stdenv.mkDerivation rec {
|
||||
--replace "gcc" "cc"
|
||||
'';
|
||||
|
||||
nativeBuildInputs = stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames;
|
||||
nativeBuildInputs = lib.optional stdenv.isDarwin fixDarwinDylibNames;
|
||||
|
||||
buildInputs = [ blas lapack gfortran.cc.lib ];
|
||||
|
||||
@@ -39,7 +39,7 @@ stdenv.mkDerivation rec {
|
||||
runHook postInstall
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Splitting Conic Solver";
|
||||
longDescription = ''
|
||||
Numerical optimization package for solving large-scale convex cone problems
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, gfortran, perl }:
|
||||
{ lib, stdenv, fetchurl, gfortran, perl }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "spooles";
|
||||
@@ -15,7 +15,7 @@ stdenv.mkDerivation rec {
|
||||
./spooles.patch
|
||||
];
|
||||
|
||||
postPatch = stdenv.lib.optionalString stdenv.hostPlatform.isDarwin ''
|
||||
postPatch = lib.optionalString stdenv.hostPlatform.isDarwin ''
|
||||
substituteInPlace makefile --replace '-Wl,-soname' '-Wl,-install_name'
|
||||
'';
|
||||
|
||||
@@ -42,7 +42,7 @@ stdenv.mkDerivation rec {
|
||||
|
||||
nativeBuildInputs = [ perl ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://www.netlib.org/linalg/spooles/";
|
||||
description = "Library for solving sparse real and complex linear systems of equations";
|
||||
license = licenses.publicDomain;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, cmake
|
||||
, gnum4
|
||||
@@ -22,7 +22,7 @@ stdenv.mkDerivation rec {
|
||||
gnum4
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Graph algorithms in the language of linear algebra";
|
||||
homepage = "http://faculty.cse.tamu.edu/davis/GraphBLAS.html";
|
||||
license = licenses.asl20;
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, gfortran, blas, lapack }:
|
||||
{ lib, stdenv, fetchurl, gfortran, blas, lapack }:
|
||||
|
||||
let
|
||||
int_t = if blas.isILP64 then "int64_t" else "int32_t";
|
||||
@@ -33,7 +33,7 @@ stdenv.mkDerivation rec {
|
||||
"LAPACK=-llapack"
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://faculty.cse.tamu.edu/davis/suitesparse.html";
|
||||
description = "A suite of sparse matrix algorithms";
|
||||
license = with licenses; [ bsd2 gpl2Plus lgpl21Plus ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, gfortran, blas, lapack
|
||||
{ lib, stdenv, fetchurl, gfortran, blas, lapack
|
||||
, enableCuda ? false, cudatoolkit
|
||||
}:
|
||||
|
||||
@@ -27,11 +27,11 @@ stdenv.mkDerivation {
|
||||
-e '/CHOLMOD_CONFIG/ s/$/-DNPARTITION -DLONGBLAS=${int_t}/' \
|
||||
-e '/UMFPACK_CONFIG/ s/$/-DLONGBLAS=${int_t}/'
|
||||
''
|
||||
+ stdenv.lib.optionalString stdenv.isDarwin ''
|
||||
+ lib.optionalString stdenv.isDarwin ''
|
||||
sed -i "SuiteSparse_config/SuiteSparse_config.mk" \
|
||||
-e 's/^[[:space:]]*\(LIB = -lm\) -lrt/\1/'
|
||||
''
|
||||
+ stdenv.lib.optionalString enableCuda ''
|
||||
+ lib.optionalString enableCuda ''
|
||||
sed -i "SuiteSparse_config/SuiteSparse_config.mk" \
|
||||
-e 's|^[[:space:]]*\(CUDA_ROOT =\)|CUDA_ROOT = ${cudatoolkit}|' \
|
||||
-e 's|^[[:space:]]*\(GPU_BLAS_PATH =\)|GPU_BLAS_PATH = $(CUDA_ROOT)|' \
|
||||
@@ -55,7 +55,7 @@ stdenv.mkDerivation {
|
||||
"LAPACK=-llapack"
|
||||
];
|
||||
|
||||
NIX_CFLAGS_COMPILE = stdenv.lib.optionalString stdenv.isDarwin " -DNTIMER";
|
||||
NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin " -DNTIMER";
|
||||
|
||||
postInstall = ''
|
||||
# Build and install shared library
|
||||
@@ -64,7 +64,7 @@ stdenv.mkDerivation {
|
||||
for i in "$out"/lib/lib*.a; do
|
||||
ar -x $i
|
||||
done
|
||||
${if enableCuda then cudatoolkit else stdenv.cc.outPath}/bin/${if enableCuda then "nvcc" else "cc"} *.o ${if stdenv.isDarwin then "-dynamiclib" else "--shared"} -o "$out/lib/libsuitesparse${SHLIB_EXT}" -lblas ${stdenv.lib.optionalString enableCuda "-lcublas"}
|
||||
${if enableCuda then cudatoolkit else stdenv.cc.outPath}/bin/${if enableCuda then "nvcc" else "cc"} *.o ${if stdenv.isDarwin then "-dynamiclib" else "--shared"} -o "$out/lib/libsuitesparse${SHLIB_EXT}" -lblas ${lib.optionalString enableCuda "-lcublas"}
|
||||
)
|
||||
for i in umfpack cholmod amd camd colamd spqr; do
|
||||
ln -s libsuitesparse${SHLIB_EXT} "$out"/lib/lib$i${SHLIB_EXT}
|
||||
@@ -90,7 +90,7 @@ stdenv.mkDerivation {
|
||||
nativeBuildInputs = [ gfortran ];
|
||||
buildInputs = [ blas lapack ];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://faculty.cse.tamu.edu/davis/suitesparse.html";
|
||||
description = "A suite of sparse matrix algorithms";
|
||||
license = with licenses; [ bsd2 gpl2Plus lgpl21Plus ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitHub
|
||||
, gfortran
|
||||
, blas, lapack
|
||||
@@ -24,7 +24,7 @@ stdenv.mkDerivation rec {
|
||||
};
|
||||
|
||||
nativeBuildInputs = [
|
||||
] ++ stdenv.lib.optional stdenv.isDarwin fixDarwinDylibNames;
|
||||
] ++ lib.optional stdenv.isDarwin fixDarwinDylibNames;
|
||||
|
||||
# Use compatible indexing for lapack and blas used
|
||||
buildInputs = assert (blas.isILP64 == lapack.isILP64); [
|
||||
@@ -33,7 +33,7 @@ stdenv.mkDerivation rec {
|
||||
gfortran.cc.lib
|
||||
gmp
|
||||
mpfr
|
||||
] ++ stdenv.lib.optional enableCuda cudatoolkit;
|
||||
] ++ lib.optional enableCuda cudatoolkit;
|
||||
|
||||
preConfigure = ''
|
||||
# Mongoose and GraphBLAS are packaged separately
|
||||
@@ -45,13 +45,13 @@ stdenv.mkDerivation rec {
|
||||
"INSTALL_INCLUDE=${placeholder "dev"}/include"
|
||||
"JOBS=$(NIX_BUILD_CORES)"
|
||||
"MY_METIS_LIB=-lmetis"
|
||||
] ++ stdenv.lib.optionals blas.isILP64 [
|
||||
] ++ lib.optionals blas.isILP64 [
|
||||
"CFLAGS=-DBLAS64"
|
||||
] ++ stdenv.lib.optionals enableCuda [
|
||||
] ++ lib.optionals enableCuda [
|
||||
"CUDA_PATH=${cudatoolkit}"
|
||||
"CUDART_LIB=${cudatoolkit.lib}/lib/libcudart.so"
|
||||
"CUBLAS_LIB=${cudatoolkit}/lib/libcublas.so"
|
||||
] ++ stdenv.lib.optionals stdenv.isDarwin [
|
||||
] ++ lib.optionals stdenv.isDarwin [
|
||||
# Unless these are set, the build will attempt to use `Accelerate` on darwin, see:
|
||||
# https://github.com/DrTimothyAldenDavis/SuiteSparse/blob/v5.8.1/SuiteSparse_config/SuiteSparse_config.mk#L368
|
||||
"BLAS=-lblas"
|
||||
@@ -64,7 +64,7 @@ stdenv.mkDerivation rec {
|
||||
"library"
|
||||
];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://faculty.cse.tamu.edu/davis/suitesparse.html";
|
||||
description = "A suite of sparse matrix algorithms";
|
||||
license = with licenses; [ bsd2 gpl2Plus lgpl21Plus ];
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, cmake,
|
||||
{ lib, stdenv, fetchurl, cmake,
|
||||
gfortran, blas, lapack}:
|
||||
|
||||
assert (!blas.isILP64) && (!lapack.isILP64);
|
||||
@@ -32,6 +32,6 @@ stdenv.mkDerivation rec {
|
||||
homepage = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/";
|
||||
license = "http://crd-legacy.lbl.gov/~xiaoye/SuperLU/License.txt";
|
||||
description = "A library for the solution of large, sparse, nonsymmetric systems of linear equations";
|
||||
platforms = stdenv.lib.platforms.unix;
|
||||
platforms = lib.platforms.unix;
|
||||
};
|
||||
}
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchFromGitLab
|
||||
, makeWrapper
|
||||
, which
|
||||
@@ -61,7 +61,7 @@ stdenv.mkDerivation rec {
|
||||
"$out/bin/sympow" -sp 2p16 -curve "[1,2,3,4,5]" | grep '8.3705'
|
||||
'';
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
description = "Compute special values of symmetric power elliptic curve L-functions";
|
||||
license = {
|
||||
shortName = "sympow";
|
||||
|
||||
@@ -1,10 +1,10 @@
|
||||
{ stdenv
|
||||
{ lib, stdenv
|
||||
, fetchurl
|
||||
, addOpenGLRunpath
|
||||
, cudaSupport ? false, symlinkJoin, cudatoolkit, cudnn, nvidia_x11
|
||||
}:
|
||||
|
||||
with stdenv.lib;
|
||||
with lib;
|
||||
let
|
||||
broken = !stdenv.isLinux && !stdenv.isDarwin;
|
||||
|
||||
|
||||
@@ -33,8 +33,8 @@
|
||||
|
||||
let
|
||||
pythonEnv = python.withPackages(ps:
|
||||
stdenv.lib.optional withManual ps.sphinx
|
||||
++ stdenv.lib.optionals pythonSupport (with ps;[ pybindgen pygccxml ])
|
||||
lib.optional withManual ps.sphinx
|
||||
++ lib.optionals pythonSupport (with ps;[ pybindgen pygccxml ])
|
||||
);
|
||||
in
|
||||
stdenv.mkDerivation rec {
|
||||
@@ -63,7 +63,7 @@ stdenv.mkDerivation rec {
|
||||
patchShebangs doc/ns3_html_theme/get_version.sh
|
||||
'';
|
||||
|
||||
wafConfigureFlags = with stdenv.lib; [
|
||||
wafConfigureFlags = with lib; [
|
||||
"--enable-modules=${concatStringsSep "," modules}"
|
||||
"--with-python=${pythonEnv.interpreter}"
|
||||
]
|
||||
@@ -81,7 +81,7 @@ stdenv.mkDerivation rec {
|
||||
# to prevent fatal error: 'backward_warning.h' file not found
|
||||
CXXFLAGS = "-D_GLIBCXX_PERMIT_BACKWARD_HASH";
|
||||
|
||||
postBuild = with stdenv.lib; let flags = concatStringsSep ";" (
|
||||
postBuild = with lib; let flags = concatStringsSep ";" (
|
||||
optional enableDoxygen "./waf doxygen"
|
||||
++ optional withManual "./waf sphinx"
|
||||
);
|
||||
@@ -109,7 +109,7 @@ stdenv.mkDerivation rec {
|
||||
# strictoverflow prevents clang from discovering pyembed when bindings
|
||||
hardeningDisable = [ "fortify" "strictoverflow"];
|
||||
|
||||
meta = with stdenv.lib; {
|
||||
meta = with lib; {
|
||||
homepage = "http://www.nsnam.org";
|
||||
license = licenses.gpl3;
|
||||
description = "A discrete time event network simulator";
|
||||
|
||||
@@ -1,4 +1,4 @@
|
||||
{ stdenv, fetchurl, cmake, boost }:
|
||||
{ lib, stdenv, fetchurl, cmake, boost }:
|
||||
|
||||
stdenv.mkDerivation rec {
|
||||
pname = "ispike";
|
||||
@@ -15,8 +15,8 @@ stdenv.mkDerivation rec {
|
||||
meta = {
|
||||
description = "Spiking neural interface between iCub and a spiking neural simulator";
|
||||
homepage = "https://sourceforge.net/projects/ispike/";
|
||||
license = stdenv.lib.licenses.lgpl3;
|
||||
platforms = stdenv.lib.platforms.linux;
|
||||
maintainers = [ stdenv.lib.maintainers.nico202 ];
|
||||
license = lib.licenses.lgpl3;
|
||||
platforms = lib.platforms.linux;
|
||||
maintainers = [ lib.maintainers.nico202 ];
|
||||
};
|
||||
}
|
||||
|
||||
Reference in New Issue
Block a user