Merge pull request #26039 from knedlsepp/add-gdal-hdf4-support

gdal: Add hdf4 support

pkgs/development/libraries/gdal/default.nix

@@ -1,6 +1,6 @@
 { stdenv, fetchurl, composableDerivation, unzip, libjpeg, libtiff, zlib
 , postgresql, mysql, libgeotiff, pythonPackages, proj, geos, openssl
-, libpng, sqlite, libspatialite, poppler
+, libpng, sqlite, libspatialite, poppler, hdf4
 , libiconv
 , netcdfSupport ? true, netcdf, hdf5 , curl
 }:
@@ -17,15 +17,20 @@ composableDerivation.composableDerivation {} (fixed: rec {
   };
 
   buildInputs = [ unzip libjpeg libtiff libpng proj openssl sqlite
-    libspatialite poppler ]
+    libspatialite poppler hdf4 ]
   ++ (with pythonPackages; [ python numpy wrapPython ])
   ++ stdenv.lib.optional stdenv.isDarwin libiconv
   ++ stdenv.lib.optionals netcdfSupport [ netcdf hdf5 curl ];
 
   hardeningDisable = [ "format" ];
 
-  # Unset CC and CXX as they confuse libtool.
+  # - Unset CC and CXX as they confuse libtool.
-  preConfigure = "unset CC CXX";
+  # - teach gdal that libdf is the legacy name for libhdf
+  preConfigure = ''
+      unset CC CXX
+      substituteInPlace configure \
+      --replace "-lmfhdf -ldf" "-lmfhdf -lhdf"
+    '';
 
   configureFlags = [
     "--with-jpeg=${libjpeg.dev}"
@@ -41,6 +46,7 @@ composableDerivation.composableDerivation {} (fixed: rec {
     "--with-python"               # optional
     "--with-static-proj4=${proj}" # optional
     "--with-geos=${geos}/bin/geos-config"# optional
+    "--with-hdf4=${hdf4.dev}" # optional
     (if netcdfSupport then "--with-netcdf=${netcdf}" else "")
   ];
 

pkgs/tools/misc/hdf4/default.nix

@@ -0,0 +1,76 @@
+{ stdenv
+, fetchurl
+, cmake
+, libjpeg
+, szip
+, zlib
+}:
+
+stdenv.mkDerivation rec {
+  name = "hdf-${version}";
+  version = "4.2.12";
+  src = fetchurl {
+    url = "https://support.hdfgroup.org/ftp/HDF/releases/HDF${version}/src/hdf-${version}.tar.bz2";
+    sha256 = "020jh563sjyxsgml8l809d2i1d4ms9shivwj3gbm7n0ilxbll8id";
+  };
+
+  buildInputs = [
+    cmake
+    libjpeg
+    szip
+    zlib
+  ];
+
+  preConfigure = "export SZIP_INSTALL=${szip}";
+
+  cmakeFlags = [
+    "-DBUILD_SHARED_LIBS=ON"
+    "-DBUILD_TESTING=ON"
+    "-DHDF4_BUILD_TOOLS=ON"
+    "-DHDF4_BUILD_UTILS=ON"
+    "-DHDF4_BUILD_WITH_INSTALL_NAME=OFF"
+    "-DHDF4_ENABLE_JPEG_LIB_SUPPORT=ON"
+    "-DHDF4_ENABLE_NETCDF=OFF"
+    "-DHDF4_ENABLE_SZIP_ENCODING=ON"
+    "-DHDF4_ENABLE_SZIP_SUPPORT=ON"
+    "-DHDF4_ENABLE_Z_LIB_SUPPORT=ON"
+    "-DHDF4_BUILD_FORTRAN=OFF"
+    "-DJPEG_DIR=${libjpeg}"
+  ];
+
+  doCheck = true;
+
+  preCheck = ''
+    export LD_LIBRARY_PATH=$(pwd)/bin
+  '' + stdenv.lib.optionalString (stdenv.isDarwin) ''
+    export DYLD_LIBRARY_PATH=$(pwd)/bin
+  '';
+
+  excludedTests = [
+    "MFHDF_TEST-hdftest"
+    "MFHDF_TEST-hdftest-shared"
+    "HDP-dumpsds-18"
+    "NC_TEST-nctest"
+  ];
+
+  checkPhase = let excludedTestsRegex = if (excludedTests != [])
+    then "(" + (stdenv.lib.concatStringsSep "|" excludedTests) + ")"
+    else ""; in ''
+    runHook preCheck
+    ctest -E "${excludedTestsRegex}" --output-on-failure
+    runHook postCheck
+  '';
+
+  outputs = [ "bin" "dev" "out" ];
+
+  postInstall = ''
+    moveToOutput bin "$bin"
+  '';
+
+  meta = {
+    description = "Data model, library, and file format for storing and managing data";
+    homepage = https://support.hdfgroup.org/products/hdf4/;
+    maintainers = with stdenv.lib.maintainers; [ knedlsepp ];
+    platforms = stdenv.lib.platforms.unix;
+  };
+}

pkgs/top-level/all-packages.nix

@@ -2360,6 +2360,8 @@ with pkgs;
 
   hddtemp = callPackage ../tools/misc/hddtemp { };
 
+  hdf4 = callPackage ../tools/misc/hdf4 { };
+
   hdf5 = callPackage ../tools/misc/hdf5 {
     gfortran = null;
     szip = null;