sage: use fetchSageDiff whenever possible

This commit is contained in:
Mauricio Collares
2021-03-09 20:54:55 -03:00
parent 5e74f259f3
commit a0f55e48fa
4 changed files with 37 additions and 117 deletions
@@ -9,6 +9,20 @@
# This is done because multiple derivations rely on these sources and they should
# all get the same sources with the same patches applied.
let
# Fetch a diff between `base` and `rev` on sage's git server.
# Used to fetch trac tickets by setting the `base` to the last release and the
# `rev` to the last commit of the ticket.
fetchSageDiff = { base, name, rev, sha256, ...}@args: (
fetchpatch ({
inherit name sha256;
url = "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}";
# We don't care about sage's own build system (which builds all its dependencies).
# Exclude build system changes to avoid conflicts.
excludes = [ "build/*" ];
} // builtins.removeAttrs args [ "rev" "base" "sha256" ])
);
in
stdenv.mkDerivation rec {
version = "9.2";
pname = "sage-src";
@@ -40,17 +54,13 @@ stdenv.mkDerivation rec {
# https://groups.google.com/forum/#!topic/sage-packaging/YGOm8tkADrE
./patches/sphinx-docbuild-subprocesses.patch
# Sage's workaround to pretty print dicts (in
# src/sage/doctest/forker.py:init_sage) runs too late (after
# controller.load_environment(), which imports sage.all.*) to to
# affect sage.sandpiles.Sandpile{Config,Divisor}'s pretty printer.
# Due to the sandpiles module being lazily loaded, this only
# affects the first run (subsequent runs read from an import cache
# at ~/.sage/cache and are not affected), which is probably why
# other distributions don't hit this bug. This breaks two sandpile
# tests, so do the workaround a little bit earlier.
# https://trac.sagemath.org/ticket/31053
./patches/register-pretty-printer-earlier.patch
# Register sorted dict pprinter earlier (https://trac.sagemath.org/ticket/31053)
(fetchSageDiff {
base = "9.3.beta4";
name = "register-pretty-printer-earlier.patch";
rev = "d658230ce06ca19f4a3b3a4576297ee82f2d2151";
sha256 = "sha256-9mPUV7K5PoLDH2vVaYaOfvDLDpmxU0Aj7m/eaXYotDs=";
})
];
# Since sage unfortunately does not release bugfix releases, packagers must
@@ -63,14 +73,20 @@ stdenv.mkDerivation rec {
# fix intermittent errors in Sage 9.2's psage.py (this patch is
# already included in Sage 9.3): https://trac.sagemath.org/ticket/30730
(fetchpatch {
(fetchSageDiff {
base = "9.2.rc2";
name = "fix-psage-is-locked.patch";
url = "https://git.sagemath.org/sage.git/patch/?id=75df605f216ddc7b6ca719be942d666b241520e9";
rev = "75df605f216ddc7b6ca719be942d666b241520e9";
sha256 = "0g9pl1wbb3sgs26d3bvv70cpa77sfskylv4kd255y1794f1fgk4q";
})
# fix intermittent errors in sagespawn.pyx: https://trac.sagemath.org/ticket/31052
./patches/sagespawn-implicit-casting.patch
(fetchSageDiff {
base = "9.2";
name = "sagespawn-implicit-casting.patch";
rev = "2959ac792ebd6107fe87c9af1541083de5ba02d6";
sha256 = "sha256-bWIpEGir9Kawak5CJegBMNcHm/CqhWmdru+emeSsvO0=";
})
# disable pexpect interrupt test (see https://trac.sagemath.org/ticket/30945)
./patches/disable-pexpect-intermittent-failure.patch
@@ -82,20 +98,7 @@ stdenv.mkDerivation rec {
# compatible with never dependency versions when possible. All these changes
# should come from or be proposed to upstream. This list will probably never
# be empty since dependencies update all the time.
packageUpgradePatches = let
# Fetch a diff between `base` and `rev` on sage's git server.
# Used to fetch trac tickets by setting the `base` to the last release and the
# `rev` to the last commit of the ticket.
fetchSageDiff = { base, rev, name ? "sage-diff-${base}-${rev}.patch", ...}@args: (
fetchpatch ({
inherit name;
url = "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}";
# We don't care about sage's own build system (which builds all its dependencies).
# Exclude build system changes to avoid conflicts.
excludes = [ "build/*" ];
} // builtins.removeAttrs args [ "rev" "base" ])
);
in [
packageUpgradePatches = [
# After updating smypow to (https://trac.sagemath.org/ticket/3360) we can
# now set the cache dir to be withing the .sage directory. This is not
# strictly necessary, but keeps us from littering in the user's HOME.
@@ -105,7 +108,12 @@ stdenv.mkDerivation rec {
./patches/ignore-cmp-deprecation.patch
# adapt sage's Image class to pillow 8.0.1 (https://trac.sagemath.org/ticket/30971)
./patches/pillow-update.patch
(fetchSageDiff {
base = "9.3.beta2";
name = "pillow-8.0.1-update.patch";
rev = "f05f2d0aac9c4b5abe68105cee2cc7f2c8461847";
sha256 = "sha256-uY2UlgSd5hhOUUukB4Xc3Gjy0/e7p/qyq9jdvz10IOs=";
})
# fix test output with sympy 1.7 (https://trac.sagemath.org/ticket/30985)
./patches/sympy-1.7-update.patch