sage: use fetchSageDiff whenever possible
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@@ -9,6 +9,20 @@
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# This is done because multiple derivations rely on these sources and they should
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# all get the same sources with the same patches applied.
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let
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# Fetch a diff between `base` and `rev` on sage's git server.
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# Used to fetch trac tickets by setting the `base` to the last release and the
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# `rev` to the last commit of the ticket.
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fetchSageDiff = { base, name, rev, sha256, ...}@args: (
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fetchpatch ({
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inherit name sha256;
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url = "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}";
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# We don't care about sage's own build system (which builds all its dependencies).
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# Exclude build system changes to avoid conflicts.
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excludes = [ "build/*" ];
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} // builtins.removeAttrs args [ "rev" "base" "sha256" ])
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);
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in
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stdenv.mkDerivation rec {
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version = "9.2";
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pname = "sage-src";
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@@ -40,17 +54,13 @@ stdenv.mkDerivation rec {
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# https://groups.google.com/forum/#!topic/sage-packaging/YGOm8tkADrE
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./patches/sphinx-docbuild-subprocesses.patch
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# Sage's workaround to pretty print dicts (in
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# src/sage/doctest/forker.py:init_sage) runs too late (after
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# controller.load_environment(), which imports sage.all.*) to to
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# affect sage.sandpiles.Sandpile{Config,Divisor}'s pretty printer.
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# Due to the sandpiles module being lazily loaded, this only
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# affects the first run (subsequent runs read from an import cache
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# at ~/.sage/cache and are not affected), which is probably why
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# other distributions don't hit this bug. This breaks two sandpile
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# tests, so do the workaround a little bit earlier.
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# https://trac.sagemath.org/ticket/31053
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./patches/register-pretty-printer-earlier.patch
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# Register sorted dict pprinter earlier (https://trac.sagemath.org/ticket/31053)
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(fetchSageDiff {
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base = "9.3.beta4";
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name = "register-pretty-printer-earlier.patch";
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rev = "d658230ce06ca19f4a3b3a4576297ee82f2d2151";
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sha256 = "sha256-9mPUV7K5PoLDH2vVaYaOfvDLDpmxU0Aj7m/eaXYotDs=";
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})
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];
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# Since sage unfortunately does not release bugfix releases, packagers must
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@@ -63,14 +73,20 @@ stdenv.mkDerivation rec {
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# fix intermittent errors in Sage 9.2's psage.py (this patch is
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# already included in Sage 9.3): https://trac.sagemath.org/ticket/30730
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(fetchpatch {
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(fetchSageDiff {
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base = "9.2.rc2";
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name = "fix-psage-is-locked.patch";
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url = "https://git.sagemath.org/sage.git/patch/?id=75df605f216ddc7b6ca719be942d666b241520e9";
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rev = "75df605f216ddc7b6ca719be942d666b241520e9";
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sha256 = "0g9pl1wbb3sgs26d3bvv70cpa77sfskylv4kd255y1794f1fgk4q";
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})
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# fix intermittent errors in sagespawn.pyx: https://trac.sagemath.org/ticket/31052
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./patches/sagespawn-implicit-casting.patch
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(fetchSageDiff {
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base = "9.2";
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name = "sagespawn-implicit-casting.patch";
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rev = "2959ac792ebd6107fe87c9af1541083de5ba02d6";
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sha256 = "sha256-bWIpEGir9Kawak5CJegBMNcHm/CqhWmdru+emeSsvO0=";
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})
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# disable pexpect interrupt test (see https://trac.sagemath.org/ticket/30945)
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./patches/disable-pexpect-intermittent-failure.patch
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@@ -82,20 +98,7 @@ stdenv.mkDerivation rec {
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# compatible with never dependency versions when possible. All these changes
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# should come from or be proposed to upstream. This list will probably never
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# be empty since dependencies update all the time.
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packageUpgradePatches = let
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# Fetch a diff between `base` and `rev` on sage's git server.
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# Used to fetch trac tickets by setting the `base` to the last release and the
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# `rev` to the last commit of the ticket.
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fetchSageDiff = { base, rev, name ? "sage-diff-${base}-${rev}.patch", ...}@args: (
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fetchpatch ({
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inherit name;
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url = "https://git.sagemath.org/sage.git/patch?id2=${base}&id=${rev}";
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# We don't care about sage's own build system (which builds all its dependencies).
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# Exclude build system changes to avoid conflicts.
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excludes = [ "build/*" ];
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} // builtins.removeAttrs args [ "rev" "base" ])
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);
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in [
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packageUpgradePatches = [
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# After updating smypow to (https://trac.sagemath.org/ticket/3360) we can
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# now set the cache dir to be withing the .sage directory. This is not
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# strictly necessary, but keeps us from littering in the user's HOME.
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@@ -105,7 +108,12 @@ stdenv.mkDerivation rec {
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./patches/ignore-cmp-deprecation.patch
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# adapt sage's Image class to pillow 8.0.1 (https://trac.sagemath.org/ticket/30971)
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./patches/pillow-update.patch
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(fetchSageDiff {
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base = "9.3.beta2";
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name = "pillow-8.0.1-update.patch";
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rev = "f05f2d0aac9c4b5abe68105cee2cc7f2c8461847";
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sha256 = "sha256-uY2UlgSd5hhOUUukB4Xc3Gjy0/e7p/qyq9jdvz10IOs=";
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})
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# fix test output with sympy 1.7 (https://trac.sagemath.org/ticket/30985)
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./patches/sympy-1.7-update.patch
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