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ocamlPackages.janeStreet: 0.13 → 0.14

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ocamlPackages.biocaml: 0.10.1 → 0.11.1

ocamlPackages.bistro: fix for Core 0.14

ocamlPackages.js_of_ocaml: 3.7.0 → 3.7.1

ocamlPackages.ocaml-r: 0.2.0 → 0.4.0

ocamlPackages.phylogenetics: 2020-01-25 → 2020-11-23

Co-authored-by: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
This commit is contained in:
Vincent Laporte
2020-12-18 21:03:56 +01:00
committed by Vincent Laporte
co-authored by sternenseemann
parent c2e90c4433
commit b6f7f1f673
12 changed files with 925 additions and 634 deletions
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pkgs/development/ocaml-modules/phylogenetics/default.nix
+6 -5
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@@ -1,23 +1,24 @@
{ stdenv, buildDunePackage, fetchFromGitHub, ppx_deriving
, alcotest, biocaml, gnuplot, lacaml, menhir, ocaml-r, owl, printbox }:
, alcotest, angstrom-unix, biocaml, gnuplot, gsl, lacaml, menhir, owl, printbox }:
buildDunePackage rec {
pname = "phylogenetics";
version = "unstable-2020-01-25";
version = "unstable-2020-11-23";
useDune2 = true;
src = fetchFromGitHub {
owner = "biocaml";
repo = pname;
rev = "752a7d0324709ba919ef43630a270afd45d6b734";
sha256 = "1zsxpl1yjbw6y6n1q7qk3h0l7c0lxhh8yp8bkxlwnpzlkqq28ycg";
rev = "e6e10efa0a3a8fd61bf4ab69e91a09549cc1ded6";
sha256 = "0pmypzp0rvlpzm8zpbcfkphwnhrpyfwfv44kshvx2f8nslmksh8c";
};
minimumOCamlVersion = "4.08"; # e.g., uses Float.min
checkInputs = [ alcotest ];
propagatedBuildInputs = [ biocaml gnuplot lacaml menhir ocaml-r owl ppx_deriving printbox ];
buildInputs = [ menhir ];
propagatedBuildInputs = [ angstrom-unix biocaml gnuplot gsl lacaml owl ppx_deriving printbox ];
doCheck = false; # many tests require bppsuite