buildGoPackage: remove Go deps file libs.json

After #16017 there were a lot
of comments saying that `nix` would be better than `JSON`
for Go packages dependency sets.
As said in https://github.com/NixOS/nixpkgs/pull/16017#issuecomment-229624046

    > Because of the content-addressable store, if two programs have the
    > same dependency it will already result in the same derivation in
    > the
    > store. Git also has compression in the pack files so it won't make
    > much difference to duplicate the dependencies on disk. And finally
    > most users will just use the binary builds so it won't make any
    > differences to them.

This PR removes `libs.json` file and puts all package dependencies in
theirs `deps.json`.

pkgs/tools/networking/s3gof3r/deps.json

@@ -1,8 +1,11 @@
 [
-  {
-    "include": "../../../go-modules/libs.json",
-    "packages": [
-      "github.com/jessevdk/go-flags"
-    ]
-  }
+    {
+        "goPackagePath": "github.com/jessevdk/go-flags",
+        "fetch": {
+            "type": "git",
+            "url": "https://github.com/jessevdk/go-flags",
+            "rev": "1b89bf73cd2c3a911d7b2a279ab085c4a18cf539",
+            "sha256": "027nglc5xx1cm03z9sisg0iqrhwcj6gh5z254rrpl8p4fwrxx680"
+        }
+    }
 ]