ocamlPackages: cohttp: 2.5.0 -> 4.0.0; conduit: 2.2.2 -> 4.0.0 (#118144)

* ocamlPackages.x509: 0.12.0 -> 0.13.0

https://github.com/mirleft/ocaml-x509/releases/tag/v0.13.0

* ocamlPackages.tls{,-mirage}: 0.12.8 -> 0.13.1

https://github.com/mirleft/ocaml-tls/releases/tag/v0.13.0
https://github.com/mirleft/ocaml-tls/releases/tag/v0.13.1

* ocamlPackages.ca-certs: 0.2.0 -> 0.2.1

Adds support for NIX_SSL_CERT_FILE, so we can finally run its test
suite! https://github.com/mirage/ca-certs/releases/tag/v0.2.1

* ocamlPackages.dns*: 4.6.3 -> 5.0.0

* jackline: unstable-2020-09-03 -> unstable-2021-04-23

Compatibility with tls >= 0.13.0

* ocamlPackages.ca-certs-nss: init at 3.64.0.1

* ocamlPackages.conduit: 2.2.2 -> 2.3.0

https://github.com/mirage/ocaml-conduit/releases/tag/v2.3.0

* ocamlPackages.curly: fix tests with new ca-certs behavior

* ocamlPackages.cohttp: 2.5.0 -> 4.0.0

ocamlPackages.cohttp-lwt-unix: add description

https://github.com/mirage/ocaml-cohttp/releases/tag/v4.0.0

* ocamlPackages.mirage{,-runtime,-types*}: 3.10.1 -> 3.10.3

Adjust to a few changed dependencies:
https://github.com/mirage/mirage/releases/tag/v3.10.2
https://github.com/mirage/mirage/releases/tag/v3.10.3

* ocamlPackages.conduit*: 2.3.0 -> 4.0.0

https://github.com/mirage/ocaml-conduit/releases/tag/v4.0.0

* ocamlPackages.cohttp-lwt-unix: disable tests

* ocamlPackages.dns*: 5.0.0 -> 5.0.1

https://github.com/mirage/ocaml-dns/releases/tag/v5.0.1

* ocamlPackages.awa*: 0.0.1 -> 0.0.3

https://github.com/mirage/awa-ssh/releases/tag/v0.0.2
https://github.com/mirage/awa-ssh/releases/tag/v0.0.3

* ocamlPackages.optint: 0.0.4 -> 0.1.0

https://github.com/mirage/optint/releases/tag/v0.0.5
https://github.com/mirage/optint/releases/tag/v0.1.0

* ocamlPackages.decompress: 1.3.0 -> 1.4.0

https://github.com/mirage/decompress/releases/tag/v1.4.0

* ocamlPackages.checkseum: 0.2.1 -> 0.3.1

https://github.com/mirage/checkseum/releases/tag/v0.3.0
https://github.com/mirage/checkseum/releases/tag/v0.3.1

* ocamlPackages.checkseum: allow compilation with ocaml-freestanding

* ocamlPackages.carton: 0.4.0 -> 0.4.1

https://github.com/mirage/ocaml-git/releases/tag/carton-v0.4.1

* ocamlPackages.mimic: 0.0.2 -> 0.0.3

* Upstream changed.
* https://github.com/dinosaure/mimic/releases/tag/0.0.3

* ocamlPackages.letsencrypt: 0.2.4 -> 0.2.5

* ocamlPackages.paf: 0.0.1 -> 0.0.3

* ocamlPackages.git-cohttp-mirage: remove at 3.3.3

Will be replaced by git-paf 3.4.0.

* ocamlPackages.git*: 3.3.3 -> 3.4.0

ocamlPackages.git-paf: init at 3.4.0

https://github.com/mirage/ocaml-git/releases/tag/3.4.0

* ocamlPackages.irmin*: 2.5.3 -> 2.6.0

https://github.com/mirage/irmin/releases/tag/2.6.0

pkgs/development/ocaml-modules/irmin/containers.nix

@@ -1,6 +1,6 @@
 { buildDunePackage
 , irmin, irmin-unix, irmin-git, ppx_irmin, lwt, mtime
-, alcotest, alcotest-lwt
+, alcotest, alcotest-lwt, cacert
 }:
 
 buildDunePackage {
@@ -18,7 +18,7 @@ buildDunePackage {
 
   doCheck = true;
   checkInputs = [
-    alcotest alcotest-lwt
+    alcotest alcotest-lwt cacert
   ];
 
   meta = ppx_irmin.meta // {

pkgs/development/ocaml-modules/irmin/git.nix

@@ -1,7 +1,7 @@
 { lib, buildDunePackage
 , git, irmin, irmin-test, ppx_irmin, git-cohttp-unix, git-unix
 , digestif, cstruct, fmt, astring, fpath, logs, lwt, uri
-, mtime, alcotest
+, mtime, alcotest, cacert
 }:
 
 buildDunePackage {
@@ -26,7 +26,7 @@ buildDunePackage {
     uri
   ];
 
-  checkInputs = [ mtime alcotest git-cohttp-unix git-unix irmin-test ];
+  checkInputs = [ mtime alcotest git-cohttp-unix git-unix irmin-test cacert ];
 
   doCheck = true;
 

pkgs/development/ocaml-modules/irmin/graphql.nix

@@ -1,5 +1,5 @@
 { lib, buildDunePackage, cohttp-lwt, graphql-cohttp, graphql-lwt, irmin
-, alcotest, alcotest-lwt, logs, yojson, cohttp-lwt-unix
+, alcotest, alcotest-lwt, logs, yojson, cohttp-lwt-unix, cacert
 }:
 
 buildDunePackage rec {
@@ -19,6 +19,7 @@ buildDunePackage rec {
     logs
     cohttp-lwt-unix
     yojson
+    cacert
   ];
 
   meta = irmin.meta // {

pkgs/development/ocaml-modules/irmin/http.nix

@@ -1,5 +1,6 @@
 { lib, buildDunePackage, cohttp-lwt, irmin, webmachine
 , checkseum, git-unix, irmin-git, irmin-test, digestif, git-cohttp-unix
+, cacert
 }:
 
 buildDunePackage rec {
@@ -12,7 +13,9 @@ buildDunePackage rec {
 
   propagatedBuildInputs = [ cohttp-lwt irmin webmachine ];
 
-  checkInputs = [ digestif checkseum git-cohttp-unix git-unix irmin-git irmin-test ];
+  checkInputs = [
+    digestif checkseum git-cohttp-unix git-unix irmin-git irmin-test cacert
+  ];
 
   doCheck = true;
 

pkgs/development/ocaml-modules/irmin/mirage-git.nix

@@ -1,6 +1,6 @@
 { buildDunePackage, irmin-mirage, irmin-git
 , mirage-kv, cohttp, conduit-lwt, conduit-mirage
-, git-cohttp-mirage, fmt, git, lwt, mirage-clock, uri
+, git-paf, fmt, git, lwt, mirage-clock, uri
 }:
 
 buildDunePackage {
@@ -15,7 +15,7 @@ buildDunePackage {
     cohttp
     conduit-lwt
     conduit-mirage
-    git-cohttp-mirage
+    git-paf
     fmt
     git
     lwt

pkgs/development/ocaml-modules/irmin/ppx.nix

@@ -2,11 +2,11 @@
 
 buildDunePackage rec {
   pname = "ppx_irmin";
-  version = "2.5.3";
+  version = "2.6.0";
 
   src = fetchurl {
     url = "https://github.com/mirage/irmin/releases/download/${version}/irmin-${version}.tbz";
-    sha256 = "2c8ef24cc57379c3a138f121fea350ee7b6077abc22a4fdc6a47d0c81585f3f6";
+    sha256 = "1db134221e82c424260a0e206b640fcb82902be35eea4137af2bcd9c98d3ac0f";
   };
 
   minimumOCamlVersion = "4.08";

pkgs/development/ocaml-modules/irmin/unix.nix

@@ -1,7 +1,7 @@
 { lib, buildDunePackage
 , checkseum, cmdliner, git-unix, git-cohttp-unix, yaml, fpath
 , irmin, irmin-fs, irmin-git, irmin-graphql, irmin-http
-, irmin-pack, irmin-watcher, irmin-test
+, irmin-pack, irmin-watcher, irmin-test, cacert
 }:
 
 buildDunePackage rec {
@@ -18,7 +18,9 @@ buildDunePackage rec {
     irmin-pack irmin-watcher git-cohttp-unix
   ];
 
-  checkInputs = lib.optional doCheck irmin-test;
+  checkInputs = [
+    irmin-test cacert
+  ];
 
   doCheck = true;