Commit Graph
28 Commits
Author SHA1 Message Date
Luis Pedro Coelho 034a97ecc1 pythonPackages.jug: 1.6.8 -> 1.6.9
Removes the need to patch the code for NumPy 1.17.0
2019-08-07 11:51:52 +02:00
Luis Pedro Coelho f178bee18e rocksdb: Remove gflags dependency
GFlags are only used for the tools, which are not installed in any case.
2019-07-25 16:05:50 -04:00
Luis Pedro Coelho 4d44ee06de hackage2nix: update broken-packages
conduit-zstd and conduit-algorithms were marked as broken as they
depended on "zstd" which was broken until recently (but is now working).
2019-07-05 09:09:37 +02:00
Luis Pedro Coelho 4b1e12c5b7 pythonPackages.imread: 0.6 -> 0.7.0
Mostly trivial update of version and hashes, but also explicitly use the
right dependencies
2019-05-06 06:12:09 +02:00
Luis Pedro Coelho 3fc55eec05 Prodigal: init at 2.6.3 2019-04-19 08:38:14 +02:00
Luis Pedro Coelho 13a1f2c296 eggnog-mapper: init at 1.0.3 (#58905) 2019-04-14 17:22:47 -07:00
Luis Pedro Coelho da402892dc ghc: make disableLargeAddressSpace configurable
Even on Linux/NixOS, it can be useful to have a compiler without the
large address space as it creates issues in some contexts.
2019-04-02 09:52:47 +02:00
Luis Pedro Coelho bf48451959 megahit: init at 1.1.4
This is widely used in bioinformatics for assembling genomes &
metagenomes
2019-03-31 05:56:14 +02:00
Luis Pedro Coelho 0671a2b6d4 pythonPackage.jug: 1.6.1 -> 1.6.3
Minor update to Jug (Python package)
2017-11-01 10:35:20 +01:00
Luis Pedro Coelho c2dc21ea85 pythonPackages.jug: 1.4.0 -> 1.6.1
Update Jug Python package
2017-08-30 21:24:09 +02:00
Luis Pedro Coelho b85c13a643 pythonPackages.jug: 1.3.0 -> 1.4.0 2017-02-10 00:00:09 +01:00
Luis Pedro Coelho f3108c5bd2 pythonPackages.natbib: fix for Python 3.5 (#21114)
pathlib is part of the standard library starting in version 3.5.
2016-12-16 11:22:06 +01:00
Luis Pedro Coelho c92a549f6c pythonPackages.jug: 1.2.2 -> 1.3.0
Update jug to newest release.
2016-11-07 08:38:20 +01:00
Luis Pedro Coelho 8ff62102cb pythonPackages.biopython : init at 1.68
BioPython is a set of bioinformatics utilities in Python.
2016-10-06 13:56:49 +02:00
Luis Pedro Coelho 43f13dacb9 imread: 0.5.1 -> 0.6 2016-10-03 12:53:33 +02:00
Luis Pedro Coelho 9934513fdd mahotas: 1.4.1 -> 1.4.2 2016-10-03 11:45:20 +02:00
Luis Pedro Coelho 651e5992c2 jug: 1.2.1 -> 1.2.2 (#16497)
bugfix release
2016-06-25 20:57:11 +02:00
Luis Pedro Coelho 26ef210da2 shiboken: add support for Python 3.5
Development upstream is stalled, but this is a trivial patch.
2016-06-15 23:18:34 +02:00
Luis Pedro Coelho bd617cb185 init bwa at 0.7.15
Closes #16064
2016-06-08 17:25:20 +01:00
Luis Pedro Coelho 57c7fd1971 python-jug: init at 1.2.1
Python jug is a Python tool for reproducibly running tasks in parallel.
2016-05-16 11:12:32 +02:00
Luis Pedro Coelho 6607345d10 chessx: install chessx.desktop file 2016-03-23 20:30:24 +01:00
Luis Pedro Coelho 8be123e92f pythonPackages.imread: add webp support
pkg-config needs to be present at build time for webp support to be
auto-detected by the build script.
2016-03-13 16:41:13 +01:00
Luis Pedro Coelho 7a6debc791 zotero: 4.0.26 -> 4.0.28.8
The previous version was too old for the current version of firefox and
syncing failed with an error: "req.sendAsBinary is not a function". This
new version solves this.

See https://forums.zotero.org/discussion/48500/bug-with-firefox-plugin/
2015-12-31 13:13:31 +01:00
Luis Pedro Coelho c570bc50bc chessx: init at 1.3.2
Chessx is a chess database GUI. Using the stockfish engine, users can
also analyse games.
2015-12-30 23:19:44 +01:00
Luis Pedro Coelho 8bec69e9c8 stockfish: init at 6 2015-12-30 23:19:39 +01:00
Luis Pedro Coelho d24b2a2aa2 mahotas: 1.4.0 -> 1.4.1
This new release should fix all errors on 32 bit systems
(reported here:
https://github.com/NixOS/nixpkgs/pull/11699#issuecomment-165410506)
2015-12-20 23:22:41 +01:00
Luis Pedro Coelho a77a8e3ca6 python.mahotas: init at 1.4.0
This is a computer vision package for Python based on numpy
2015-12-14 11:22:47 +01:00
Luis Pedro Coelho 5ff41b047a python.imread: init at 0.5.1
This is a package to read image files into numpy arrays.
2015-12-14 11:19:11 +01:00